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HIPAA Compliant File Transfer, With The BAA Included

Files.com is the File Orchestration Platform healthcare runs on: payer claims, eligibility intake, clinical results, and terabyte research datasets, exchanged with partners under a pre-approved HIPAA BAA included with Files.com Enterprise. 4,000+ organizations trust Files.com.

No pushy sales process

Every protocol included
SOC 2 Type II audited
Live in minutes
  • G2 Leader — Managed File Transfer, Summer 2026
  • G2 Best Results — Managed File Transfer, Summer 2026
  • G2 Best Usability — Managed File Transfer, Summer 2026
  • G2 Best Relationship — Managed File Transfer, Summer 2026
  • G2 Easiest Setup — iPaaS, Summer 2026
  • AWS Partner — Files.com is a verified AWS Partner.
  • Google Cloud Partner — Files.com is a verified Google Cloud Partner.
  • Microsoft Partner — Files.com is a verified Microsoft Partner.

4,000+ organizations rely on Files.com every day

Real companies. Real file flows. Real results.

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Delivery You Can Prove

Healthcare file exchange has a higher bar than moving the bytes: prove what arrived, when, and from whom. A radiology result that nobody picked up is a patient-safety problem. A payer file that silently failed to decrypt is a week of manual reprocessing. A delivery dispute with a counterparty is an audit exposure until someone produces the record.

Most healthcare teams run that exchange on a mix of an aging MFT appliance, a separate interface engine for HL7 and EDI, one-off SFTP scripts, and email, held together by the same people who are supposed to be building new things.

Files.com replaces the stack with one platform where the record is built in: a pre-approved HIPAA BAA, a tamper-proof audit trail of every action, PGP decryption as a folder setting instead of a failure mode, HL7 and X12 transformation via TransformScript, and the outbound-only Agent for the firewall-locked networks healthcare actually runs.

Clinics and plans also collect insurance cards, records, and enrollment paperwork from patients through a branded upload page, with no account for the patient.

The Workflows Healthcare Actually Runs

Pharmacy, payer, provider, research, and diagnostics teams each run a different exchange. These are the ones Files.com carries in production every day.

Claims And Remittances Route Themselves

837 claims go out, 835 remittances come back, and content-aware routing sends each file type to the right clearinghouse or downstream system. Nobody on the EDI team sorts an inbox by hand.

Eligibility Intake That Onboards Itself

A folder, a credential, and an IP allow-list per employer group, payer, or EDI vendor. Onboarding a new partner is configuration, not an infrastructure build, even when the vendor mandates GPG and SSH-key-only access.

Results Delivery With A Receipt

The audit trail records every pickup, so a delivery dispute is a lookup. Run delete-on-pickup and an empty folder is proof the physician got the result.

Terabyte Research Data, Delivered

Genomic files of hundreds of gigabytes and multi-terabyte sequencing runs move at full speed into whatever cloud each partner runs. Lab scientists drag a folder, and nobody has to become an engineer to deliver a dataset.

HL7 And X12, Transformed On Arrival

Files TransformScript transforms HL7 messages and X12 EDI inside the platform, at the moment the file lands. The interface-engine-plus-MFT two-vendor pattern collapses into one.

PHI Off Email, Fax, And Consumer Sync

Inboxes and expiring share links give referring providers, employer HR contacts, and pharmacy staff a governed path that works with nothing but a browser. A large share of healthcare counterparties have no IT department at all.

Healthcare Runs On Files.com

Works With What Healthcare Already Runs

Files.com moves files in and out of the systems healthcare already depends on: interface engines like Mirth, EHR-adjacent exchange with MEDITECH and eClinicalWorks environments, clearinghouses like Change Healthcare, Veeva Vault for regulated content, and Workday and Oracle on the back office. Identity comes from Okta or Microsoft Entra ID with SCIM provisioning. Storage mounts in place: Amazon S3, Azure Blob, Google Cloud Storage, or the on-prem NAS behind your firewall. The platform is the exchange layer, and your data stays where you put it.

One Platform To Replace Your Whole File Stack

The MFT appliance, the interface engine, the scripts, and the email workarounds — replaced by one platform with the compliance record built in.

Cloud SFTP, FTP & MFT Server

Dedicated, fully managed SFTP, FTPS, and FTP endpoints, with every protocol your partners already use. No servers to patch and no DMZ to maintain.Replaces IBM Sterling, GoAnywhere, MOVEit, Axway, AWS Transfer Family

See Cloud SFTP Server

File Sharing & Collaboration

Branded portals, secure share links, and request inboxes, plus co-editing for Office documents. Partners and customers get access with no account and nothing to install.Replaces Box, Dropbox, ShareFile, Egnyte

See Collaboration

Fast File Transfer & Acceleration

Move files up to 5 TB at full speed over any distance, with chunked, resumable transfers on standard protocols and custom UDP acceleration in the Agent.Replaces IBM Aspera, Signiant

See Fast Transfers

Automation & Workflows

Trigger on a file arriving, a schedule, or an event, then route, convert, and notify, with retries and alerts built in. The reliable replacement for the scripts and cron jobs nobody wants to own.Replaces fragile custom scripts and cron jobs

See Automations

Data Transformation & Format Conversion

Reshape files inline as they move: convert formats and pull fields out of EDI, HL7, XML, JSON, and CSV, so downstream systems get exactly what they expect.Replaces hand-built parsing and conversion scripts

See Transform & Extract

Desktop Drive & File Server Replacement

Native apps for Windows, macOS, iOS, and Android mount your cloud storage as a local drive, so you can retire aging file servers and NAS without changing how people work.Replaces NetApp, Nasuni, aging NAS, Windows file servers

See File Server Replacement

Every capability runs on one platform — SOC 2 Type II certified, HIPAA BAA available, with a complete audit trail on every action.

Security And Compliance, Built In

SOC 2 Type II audited, HIPAA BAA available, and zero breaches in 15+ years of operation — the posture your vendor security review is looking for.

SOC 2 Type II

Independently audited, every year.

FedRAMP Certified

Certified under FedRAMP 20x at Class A, with Class B in progress.

HIPAA & GDPR

BAA and DPA available, with EU and regional data residency.

Encrypted End To End

AES-256 at rest, TLS 1.2 and 1.3 in transit.

SSO, SCIM & MFA

SAML SSO, SCIM provisioning, MFA, and granular role-based access.

Complete Audit Trail

Every action logged immutably and streamed to your SIEM.

See Our Compliance Center

Every Support Request Reaches A Senior Engineer

No Level 1 runaround, no script, no callback queue. When something breaks, you reach a seasoned file transfer expert who can actually fix it.

All-Engineer Support Desk

Talk to file transfer experts who understand how you work.

  • Replies in under an hour
  • Talk straight to engineers
  • We watch for problems
  • We own the escalation
See How Support Works

Onboarding Services

A dedicated Customer Engineer and a step-by-step plan — most teams are live within five business days.

  • Migration planning
  • Help on go-live day
  • Workflow tuning
  • Training for your team
See How Onboarding Works

Enterprise Support

Enterprise Support is a real relationship, not a faster queue. Enterprise Support customers run Files.com around the clock as critical infrastructure, and we’re there when something can’t wait until Monday morning.

See Enterprise Support
“We use Files.com for automated SFTP transfers with our trading partners. The automation lets us handle every partner's quirks without writing custom code.”
Phillip Webb, Health Payer Consortium
Phillip Webb
Director of PPO Analysis and EDI Services, Health Payer Consortium
“Files.com's strengths are simplicity, ease of use, and the cloud connectors. We don't have to invent custom infrastructure for every partner.”
Tommy Chapley, Equifax
Tommy Chapley
Senior Software Engineer, Equifax
“Files.com is robust and scales to a large enterprise. We get multiple files per minute, per second — and we're a 24/7 organization, so everything has to always be up.”
Nelson Miranda, Spirit Airlines
Nelson Miranda
Sr. Systems Engineer, Spirit Airlines

How Healthcare Teams Run It, By Counterparty

The workflows above are what moves. This is who it moves with, and how each exchange stays inside the BAA.

Payer And Clearinghouse Feeds Under One BAA

837 claims out and 835 remittances back run over SFTP with each payer and clearinghouse on its own account, key and schedule, so a revenue-cycle team stops logging into a dozen portals and the BAA covers the whole exchange.

834 Enrollment From Many Senders, One Endpoint

PGP-encrypted enrollment files from hundreds of employers, brokers and carriers land on a single HIPAA-covered endpoint, decrypt in their own folders and route to the eligibility system, with the missing file flagged on the day.

Records Released By Expiring Link, Not Fax

A patient’s history goes to another practice, a patient or an attorney as a password-protected link that expires on a date you set, so the release is logged and recallable instead of scattered across fax machines and discs. Every disclosure leaves a record the records office can stand behind.

Clinical Trial Data Segregated Per Study

Sponsors, CROs, sites and labs exchange study data in per-study isolated sites with their own administrators, so each counterparty sees only its trial and the whole exchange stands up to Part 11 and privacy review.

Healthcare File Transfer FAQ

What healthcare IT teams ask most when evaluating Files.com.

Yes. Files.com signs a pre-written, pre-approved HIPAA BAA with any customer on Files.com Enterprise, included in the base quote rather than sold as an add-on. See the Compliance Center for the full attestation set.

Files.com supports HIPAA-regulated workloads with the BAA, AES-256 encryption in transit and at rest, a tamper-proof audit trail on every action retained 7+ years, policy-driven retention, and SOC 2 Type II auditing. Healthcare organizations from multi-state health systems to community clinics run PHI-bearing exchange on Files.com in production.

Yes. Retention on Files.com is a folder-level policy setting: files persist for HIPAA's six-year requirement, or longer where state rules extend it, without scripts or manual cleanup. The audit log is retained for 7+ years in tamper-proof WORM format, which covers the recordkeeping side of a HIPAA program.

Yes. Files.com transforms HL7 messages and X12 EDI via Files TransformScript. Parsing, conversion, and routing happen inside the platform, in addition to the secure transport. Paired with File Extraction, inbound eligibility, claims, and remittance files route by their content the moment they land.

Files.com provides the audit-trail, access-control, and retention primitives that clinical research organizations assemble into their own validated systems — and it is used in production by research organizations whose validated systems satisfy 21 CFR Part 11. The Part 11 compliance posture lives at the application layer the customer validates, so Files.com does not claim Part 11 compliance as a binary. Contact Sales to walk through a GxP or Part 11 evaluation.

Yes. The Files.com Agent runs inside your network and makes only outbound connections: no inbound firewall rule, no new machine in the DMZ. Remote Server Mounts front the S3, Azure, or on-prem storage you already own. Partners see a modern managed endpoint. The bytes land on your storage and stay there.

Yes. 340B administrators and pharmacy services companies run eligibility, split-billing, and claims exchange on Files.com. One pharmacy services company moved its 340B workflows off Axway one workflow at a time, with PGP decryption becoming a folder setting and thousands of X12 EDI files a week flowing through the platform.

Yes. Axway, MOVEit, and GoAnywhere replacements are a standing motion in healthcare. Migrations run in parallel with the incumbent, one partner or workflow at a time, and Files.com engineers run the migration with you. Bring a renewal quote: Files.com will not be undersold against legacy MFT.

Most teams are live within five business days. Files.com Enterprise includes full onboarding: Customer Engineering builds the migration plan, then runs partner cutover and workflow tuning with you until every feed is flowing.

Files.com hosts the HIPAA-covered endpoint under a signed BAA. Each plan or partner gets its own SFTP account and folder on your domain, files decrypt on arrival if they are PGP-encrypted, and automations hand them to the system that processes them. There is no server to patch, and every transfer is in the audit log.

Send a Files.com share link with a password, a bound recipient and an expiration date, from a site covered by the BAA. The recipient opens it in a browser with no account, the download is logged, and the link stops working on the date you set, which is the recallability email and fax never had.

Run each study as its own folder tree, or as its own child site with its own administrators, on Files.com. Sites, CROs and labs get accounts scoped to their study, single sign-on and SCIM keep the roster current, and the audit log records every access per study for the sponsor’s monitors.

Run Your Healthcare File Exchange On Files.com

4,000+ organizations run mission-critical file transfer on Files.com. Talk to our team or validate the technology on a free trial.

No pushy sales process